Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | EPS31_03865 | Not Available | Negative | 818348 - 818698 | 13125.6 |
| O-spanin (rz1) | EPS31_03870 | Not Available | Negative | 818991 - 819131 | 4908.76 |
| Tail component | EPS31_10850 | Not Available | Positive | 2202540 - 2203268 | 25240.7 |
| Tail component | EPS31_10855 | Not Available | Positive | 2203265 - 2203594 | 12533.0 |
| Tail component | EPS31_10860 | Not Available | Positive | 2203594 - 2204292 | 25709.0 |
| Tail fiber component | EPS31_10865 | Not Available | Positive | 2204297 - 2205040 | 28274.3 |
| Tail component | EPS31_10870 | Not Available | Positive | 2204977 - 2205609 | 21863.5 |
| Tail:host specificity protein | EPS31_10875 | Not Available | Positive | 2205670 - 2206064 | 13995.3 |
| Putative tail fiber component j | EPS31_10940 | Not Available | Negative | 2220486 - 2224178 | 134870.0 |
| hypothetical protein | EPS31_10945 | Not Available | Negative | 2224159 - 2224500 | 13451.9 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






