Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase cytochrome b556 subunit | EPS31_03270 | Not Available | Positive | 703768 - 704403 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | EPS31_03275 | Not Available | Positive | 704400 - 705329 | 34720.6 |
| hypothetical protein | EPS31_03280 | Not Available | Negative | 705511 - 705753 | 9267.91 |
| copg family transcriptional regulator | EPS31_03285 | Not Available | Negative | 705972 - 706190 | 8408.23 |
| hypothetical protein | EPS31_03295 | Not Available | Negative | 706609 - 706887 | 11098.0 |
| helix-turn-helix domain-containing protein | EPS31_03305 | Not Available | Negative | 707245 - 707535 | 10870.1 |
| type ii toxin-antitoxin system rele/pare family toxin | EPS31_03310 | Not Available | Negative | 707536 - 707847 | 12190.9 |
| alpha/beta hydrolase | EPS31_03315 | Not Available | Positive | 708076 - 708984 | 33672.2 |
| hypothetical protein | EPS31_03320 | Not Available | Negative | 709152 - 710966 | 67425.5 |
| gnat family n-acetyltransferase | EPS31_03325 | Not Available | Negative | 711382 - 712371 | 37096.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






