Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | EPS31_03215 | Not Available | Positive | 691051 - 691365 | 12235.4 |
| porin | EPS31_03220 | Not Available | Negative | 691406 - 692800 | 51840.2 |
| pts fructose transporter subunit iia | EPS31_03225 | Not Available | Positive | 693277 - 693723 | 16117.5 |
| pts fructose-like transporter subunit iibc | EPS31_03230 | Not Available | Positive | 693734 - 695185 | 51124.4 |
| aminopeptidase | EPS31_03235 | Not Available | Positive | 695175 - 696245 | 38795.8 |
| hth domain-containing protein | EPS31_03240 | Not Available | Positive | 696245 - 697993 | 65886.6 |
| sulfurtransferase fdhd | EPS31_03250 | Not Available | Negative | 698779 - 699612 | 30533.8 |
| sulfate abc transporter substrate-binding protein | EPS31_03255 | Not Available | Positive | 699806 - 700393 | 21369.5 |
| formate dehydrogenase-n subunit alpha | EPS31_03260 | Not Available | Positive | 700442 - 702856 | 89604.2 |
| formate dehydrogenase subunit beta | EPS31_03265 | Not Available | Positive | 702869 - 703771 | 33102.1 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






