Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress sensor histidine kinase cpxa | EPS31_03165 | Not Available | Positive | 679732 - 681105 | 51627.3 |
| 6-n-hydroxylaminopurine resistance protein | EPS31_03170 | Not Available | Negative | 681361 - 682035 | 25325.1 |
| 2-keto-3-deoxygluconate permease | EPS31_03175 | Not Available | Negative | 682184 - 683167 | 33743.4 |
| superoxide dismutase | EPS31_03180 | Not Available | Negative | 683427 - 684047 | 23080.2 |
| l-rhamnose/proton symporter rhat | EPS31_03185 | Not Available | Positive | 684332 - 685366 | 37320.1 |
| hth-type transcriptional activator rhar | EPS31_03190 | Not Available | Negative | 685363 - 686301 | 35620.3 |
| hth-type transcriptional activator rhas | EPS31_03195 | Not Available | Negative | 686285 - 687121 | 32317.2 |
| rhamnulokinase | EPS31_03200 | Not Available | Positive | 687409 - 688878 | 53934.9 |
| l-rhamnose isomerase | EPS31_03205 | Not Available | Positive | 688875 - 690134 | 47202.0 |
| rhamnulose-1-phosphate aldolase | EPS31_03210 | Not Available | Positive | 690217 - 691041 | 30156.2 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






