Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf406 domain-containing protein | EPS31_03115 | Not Available | Negative | 671441 - 671740 | 10746.7 |
| duf805 domain-containing protein | EPS31_03120 | Not Available | Negative | 671952 - 672392 | 16543.5 |
| duf1454 family protein | EPS31_03125 | Not Available | Positive | 672493 - 673092 | 21736.1 |
| triose-phosphate isomerase | EPS31_03130 | Not Available | Positive | 673200 - 673967 | 26973.3 |
| cdp-diacylglycerol diphosphatase | EPS31_03135 | Not Available | Negative | 674022 - 674777 | 28424.3 |
| sulfate abc transporter substrate-binding protein | EPS31_03140 | Not Available | Negative | 674884 - 675873 | 36661.2 |
| atp-dependent 6-phosphofructokinase | EPS31_03145 | Not Available | Negative | 676193 - 677155 | 34844.2 |
| cation-efflux pump fief | EPS31_03150 | Not Available | Negative | 677336 - 678238 | 32929.2 |
| cell-envelope stress modulator cpxp | EPS31_03155 | Not Available | Negative | 678387 - 678887 | 19008.5 |
| envelope stress response regulator transcription factor cpxr | EPS31_03160 | Not Available | Positive | 679037 - 679735 | 26313.7 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






