Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef-p beta-lysylation protein epmb | EPS31_02965 | Not Available | Positive | 642089 - 643117 | 38715.8 |
| hypothetical protein | EPS31_02970 | Not Available | Positive | 643352 - 644221 | 32948.9 |
| duf4156 domain-containing protein | EPS31_02975 | Not Available | Negative | 644271 - 644624 | 11959.2 |
| chaperonin groel | EPS31_02980 | Not Available | Negative | 644762 - 646408 | 57332.4 |
| co-chaperone groes | EPS31_02985 | Not Available | Negative | 646452 - 646745 | 10387.6 |
| l-methionine/branched-chain amino acid transporter | EPS31_02990 | Not Available | Positive | 647021 - 648277 | 44742.1 |
| membrane protein fxsa | EPS31_02995 | Not Available | Negative | 648293 - 648769 | 17679.1 |
| aspartate ammonia-lyase | EPS31_03000 | Not Available | Positive | 649106 - 650542 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | EPS31_03005 | Not Available | Positive | 650660 - 651961 | 45753.5 |
| divalent cation tolerance protein cuta | EPS31_03010 | Not Available | Positive | 652076 - 652414 | 12331.7 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






