Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | EPS31_02810 | Not Available | Positive | 615244 - 615630 | 14058.0 |
| signal transduction protein pmrd | EPS31_02815 | Not Available | Negative | 615624 - 615890 | 9899.01 |
| o-succinylbenzoate--coa ligase | EPS31_02820 | Not Available | Negative | 616000 - 617355 | 50097.3 |
| o-succinylbenzoate synthase | EPS31_02825 | Not Available | Negative | 617352 - 618314 | 35509.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EPS31_02830 | Not Available | Negative | 618314 - 619171 | 31634.9 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EPS31_02835 | Not Available | Negative | 619186 - 619944 | 27866.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EPS31_02840 | Not Available | Negative | 619941 - 621611 | 61370.5 |
| isochorismate synthase menf | EPS31_02845 | Not Available | Negative | 621700 - 622995 | 48734.3 |
| stress response protein elab | EPS31_02850 | Not Available | Negative | 623074 - 623379 | 11306.3 |
| gnat family n-acetyltransferase | EPS31_02855 | Not Available | Negative | 623434 - 623895 | 17466.8 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






