Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail subunit | EPS31_03815 | Not Available | Negative | 810471 - 811175 | 24397.7 |
| Putative minor tail protein | EPS31_03820 | Not Available | Negative | 811235 - 811579 | 12377.6 |
| Gp10 | EPS31_03825 | Not Available | Negative | 811576 - 812025 | 16759.1 |
| Putative head-tail adaptor | EPS31_03830 | Not Available | Negative | 812022 - 812360 | 11980.6 |
| Hypothetical protein | EPS31_03835 | Not Available | Negative | 812369 - 812686 | 11926.3 |
| Capsid | EPS31_03840 | Not Available | Negative | 812763 - 813980 | 45022.2 |
| Capsid protease | EPS31_03845 | Not Available | Negative | 813995 - 814594 | 22401.2 |
| Portal protein | EPS31_03850 | Not Available | Negative | 814587 - 815813 | 46553.5 |
| Terminase large subunit | EPS31_03855 | Not Available | Negative | 815961 - 817718 | 66163.9 |
| Terminase small subunit | EPS31_03860 | Not Available | Negative | 817718 - 818200 | 17960.7 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






