Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase atos | EPS31_02605 | Not Available | Positive | 559232 - 561058 | 67807.1 |
| acetoacetate metabolism transcriptional regulator atoc | EPS31_02610 | Not Available | Positive | 561055 - 562440 | 52151.5 |
| acetate coa-transferase subunit alpha | EPS31_02615 | Not Available | Positive | 562636 - 563298 | 23527.7 |
| coa transferase subunit b | EPS31_02620 | Not Available | Positive | 563298 - 563948 | 22961.1 |
| tigr00366 family protein | EPS31_02625 | Not Available | Positive | 563945 - 565267 | 47530.6 |
| acetyl-coa c-acetyltransferase | EPS31_02630 | Not Available | Positive | 565298 - 566482 | 40434.1 |
| duf2135 domain-containing protein | EPS31_02635 | Not Available | Negative | 566556 - 567332 | 28245.2 |
| duf2300 domain-containing protein | EPS31_02640 | Not Available | Negative | 567337 - 568986 | 61435.1 |
| alpha-2-macroglobulin family protein | EPS31_02645 | Not Available | Negative | 568987 - 573381 | 162484.0 |
| duf1175 domain-containing protein | EPS31_02650 | Not Available | Negative | 573525 - 574148 | 23738.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






