Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1414 domain-containing protein | EPS31_02455 | Not Available | Positive | 525383 - 525610 | 8288.95 |
| cardiolipin transport protein pbga | EPS31_02460 | Not Available | Positive | 525630 - 527390 | 67329.8 |
| Trna-pro | Not Available | Not Available | Positive | 527465 - 527541 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | EPS31_02470 | Not Available | Negative | 527643 - 530234 | 91130.0 |
| nitrate/nitrite response regulator protein narp | EPS31_02475 | Not Available | Positive | 530554 - 531201 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | EPS31_02480 | Not Available | Negative | 531237 - 532289 | 39091.3 |
| thiol:disulfide interchange protein dsbe | EPS31_02485 | Not Available | Negative | 532286 - 532843 | 20810.1 |
| heme lyase ccmf/nrfe family subunit | EPS31_02490 | Not Available | Negative | 532840 - 534783 | 71420.6 |
| cytochrome c maturation protein ccme | EPS31_02495 | Not Available | Negative | 534780 - 535259 | 17699.4 |
| heme exporter protein ccmd | EPS31_02500 | Not Available | Negative | 535256 - 535465 | 7731.56 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






