Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | EPS31_02305 | Not Available | Positive | 491023 - 492072 | 36884.3 |
| deoxyribonuclease iv | EPS31_02310 | Not Available | Positive | 492146 - 493003 | 31463.2 |
| sugar kinase | EPS31_02315 | Not Available | Positive | 493006 - 494094 | 39706.6 |
| nupc/nupg family nucleoside cnt transporter | EPS31_02320 | Not Available | Negative | 494150 - 495400 | 43402.2 |
| ribosylpyrimidine nucleosidase | EPS31_02325 | Not Available | Negative | 495500 - 496441 | 33736.0 |
| transcriptional regulator yeil | EPS31_02330 | Not Available | Positive | 496571 - 497269 | 26862.6 |
| nupc/nupg family nucleoside cnt transporter | EPS31_02335 | Not Available | Negative | 497337 - 498587 | 43434.4 |
| pseudouridine-5'-phosphate glycosidase | EPS31_02340 | Not Available | Negative | 498681 - 499619 | 32969.9 |
| pseudouridine kinase | EPS31_02345 | Not Available | Negative | 499607 - 500548 | 33602.9 |
| pts fructose transporter subunit iibc | EPS31_02350 | Not Available | Negative | 500972 - 502663 | 57522.6 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






