Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative deor transcriptional regulator ygbi | EPS31_01955 | Not Available | Negative | 408322 - 409101 | 27960.9 |
| Putative zinc-containing alcohol dehydrogenase superfamily protein | EPS31_01960 | Not Available | Negative | 409201 - 410241 | 37508.6 |
| Host specificity protein | EPS31_03775 | Not Available | Negative | 803728 - 804122 | 13920.2 |
| Putative tail component | EPS31_03780 | Not Available | Negative | 804183 - 804830 | 22533.2 |
| Tail fiber component | EPS31_03785 | Not Available | Negative | 804728 - 805471 | 28443.5 |
| Tail component | EPS31_03790 | Not Available | Negative | 805477 - 806175 | 25623.9 |
| Minor tail protein | EPS31_03795 | Not Available | Negative | 806175 - 806531 | 13732.2 |
| Putative tail component | EPS31_03800 | Not Available | Negative | 806509 - 809736 | 115463.0 |
| Phage tail protein | EPS31_03805 | Not Available | Negative | 809783 - 810043 | 9538.26 |
| Putative tail assembly chaperone | EPS31_03810 | Not Available | Negative | 810085 - 810471 | 14561.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






