Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactoside abc transporter permease | EPS31_02250 | Not Available | Negative | 478062 - 479072 | 35552.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | EPS31_02255 | Not Available | Negative | 479088 - 480608 | 56418.8 |
| galactose/glucose abc transporter substrate-binding protein mglb | EPS31_02260 | Not Available | Negative | 480669 - 481667 | 35714.5 |
| hth-type transcriptional regulator gals | EPS31_02265 | Not Available | Negative | 481947 - 482987 | 37389.1 |
| duf418 family protein | EPS31_02270 | Not Available | Negative | 483129 - 484286 | 43386.2 |
| gtp cyclohydrolase i fole | EPS31_02275 | Not Available | Negative | 484303 - 484971 | 24832.1 |
| s-formylglutathione hydrolase yeig | EPS31_02280 | Not Available | Positive | 485229 - 486065 | 31288.9 |
| catecholate siderophore receptor cira | EPS31_02285 | Not Available | Negative | 486097 - 488076 | 73372.9 |
| amino acid permease | EPS31_02295 | Not Available | Negative | 488369 - 489838 | 53536.9 |
| lysr family transcriptional regulator | EPS31_02300 | Not Available | Negative | 490043 - 490924 | 32739.7 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






