Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance outer membrane protein mdtq | EPS31_02200 | Not Available | Negative | 468610 - 470136 | 55629.2 |
| protein yohp | EPS31_02205 | Not Available | Positive | 470270 - 470353 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | EPS31_02210 | Not Available | Negative | 470726 - 471673 | 35259.6 |
| hypothetical protein | EPS31_02215 | Not Available | Positive | 471912 - 472310 | 14579.6 |
| cidb/lrgb family autolysis modulator | EPS31_02220 | Not Available | Positive | 472307 - 473002 | 24471.1 |
| cytidine deaminase | EPS31_02225 | Not Available | Positive | 473132 - 474016 | 31568.6 |
| outer membrane permeability protein sana | EPS31_02230 | Not Available | Positive | 474166 - 474885 | 27288.5 |
| duf2542 family protein | EPS31_02235 | Not Available | Positive | 474888 - 475127 | 9273.62 |
| nad(p)-dependent oxidoreductase | EPS31_02240 | Not Available | Positive | 475524 - 476762 | 44363.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | EPS31_02245 | Not Available | Positive | 476756 - 477991 | 45029.3 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






