Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EPS31_02150 | Not Available | Negative | 457104 - 457835 | 25572.2 |
| abc transporter atp-binding protein | EPS31_02155 | Not Available | Negative | 457840 - 458766 | 34371.6 |
| abc transporter permease | EPS31_02160 | Not Available | Negative | 458759 - 459916 | 41228.3 |
| abc transporter substrate-binding protein | EPS31_02165 | Not Available | Negative | 459923 - 460840 | 32500.9 |
| beta-glucosidase bglx | EPS31_02170 | Not Available | Negative | 460989 - 463286 | 83578.9 |
| d-lactate dehydrogenase | EPS31_02175 | Not Available | Positive | 463482 - 465197 | 64629.9 |
| d-alanyl-d-alanine endopeptidase | EPS31_02180 | Not Available | Negative | 465236 - 466168 | 33889.4 |
| yip1 family protein | EPS31_02185 | Not Available | Negative | 466342 - 466929 | 21678.0 |
| deda family protein | EPS31_02190 | Not Available | Positive | 467099 - 467677 | 21422.9 |
| sdr family oxidoreductase | EPS31_02195 | Not Available | Negative | 467796 - 468557 | 26859.4 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






