Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EPS31_02040 | Not Available | Positive | 424249 - 424587 | 12521.9 |
| pilus assembly protein | EPS31_02045 | Not Available | Negative | 424669 - 425703 | 37210.5 |
| fimbrial biogenesis outer membrane usher protein | EPS31_02050 | Not Available | Negative | 425714 - 428194 | 92335.1 |
| fimbrial assembly protein | EPS31_02055 | Not Available | Negative | 428210 - 428884 | 24836.3 |
| type 1 fimbrial protein | EPS31_02060 | Not Available | Negative | 428965 - 429507 | 19075.6 |
| duf2574 family protein | EPS31_02065 | Not Available | Negative | 429802 - 430083 | 10121.1 |
| iron-sulfur cluster carrier protein apbc | EPS31_02070 | Not Available | Negative | 430346 - 431455 | 39940.4 |
| methionine--trna ligase | EPS31_02075 | Not Available | Positive | 431587 - 433620 | 76304.9 |
| duf4132 domain-containing protein | EPS31_02080 | Not Available | Positive | 433761 - 437558 | 143390.0 |
| duf4132 domain-containing protein | EPS31_02085 | Not Available | Positive | 437571 - 441365 | 141324.0 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






