Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fructose-bisphosphate aldolase | EPS31_01990 | Not Available | Negative | 414801 - 415853 | 38077.4 |
| mfs transporter | EPS31_01995 | Not Available | Positive | 416110 - 417387 | 47351.8 |
| adp-ribosylglycohydrolase family protein | EPS31_02000 | Not Available | Positive | 417384 - 418388 | 35622.5 |
| sugar kinase | EPS31_02005 | Not Available | Positive | 418385 - 419350 | 34376.5 |
| gntr family transcriptional regulator | EPS31_02010 | Not Available | Negative | 419324 - 420070 | 28277.8 |
| glycosyl hydrolase 25 family protein | EPS31_02015 | Not Available | Negative | 420122 - 420940 | 31664.9 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EPS31_02020 | Not Available | Negative | 421005 - 421805 | 28635.2 |
| hydroxyethylthiazole kinase | EPS31_02025 | Not Available | Negative | 421802 - 422590 | 27360.7 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EPS31_02030 | Not Available | Negative | 422813 - 423085 | 10134.5 |
| nickel/cobalt efflux protein rcna | EPS31_02035 | Not Available | Positive | 423206 - 424030 | 30415.2 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






