Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | EPS31_01490 | Not Available | Negative | 314415 - 315542 | 42138.4 |
| flippase | EPS31_01495 | Not Available | Negative | 315552 - 316790 | 45927.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EPS31_01500 | Not Available | Negative | 316822 - 317370 | 20833.7 |
| glucose-1-phosphate thymidylyltransferase rfba | EPS31_01505 | Not Available | Negative | 317375 - 318253 | 32482.3 |
| dtdp-4-dehydrorhamnose reductase | EPS31_01510 | Not Available | Negative | 318311 - 319210 | 32664.8 |
| dtdp-glucose 4,6-dehydratase | EPS31_01515 | Not Available | Negative | 319210 - 320295 | 40499.4 |
| galu regulator galf | EPS31_01520 | Not Available | Negative | 320668 - 321561 | 32831.2 |
| colanic acid biosynthesis protein wcam | EPS31_01525 | Not Available | Negative | 321736 - 323130 | 51198.6 |
| colanic acid biosynthesis glycosyltransferase wcal | EPS31_01530 | Not Available | Negative | 323141 - 324361 | 45330.2 |
| colanic acid biosynthesis pyruvyl transferase wcak | EPS31_01535 | Not Available | Negative | 324358 - 325638 | 47359.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






