Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | EPS31_01390 | Not Available | Negative | 295018 - 296376 | 49540.5 |
| membrane protein yoei | EPS31_01395 | Not Available | Negative | 296366 - 296428 | 2241.66 |
| lysr family transcriptional regulator | EPS31_01400 | Not Available | Negative | 296643 - 297572 | 34166.9 |
| sdr family oxidoreductase | EPS31_01405 | Not Available | Negative | 297618 - 298442 | 29681.7 |
| his operon leader peptide | EPS31_01410 | Not Available | Positive | 298869 - 298919 | 2081.43 |
| atp phosphoribosyltransferase | EPS31_01415 | Not Available | Positive | 299065 - 299964 | 33368.8 |
| histidinol dehydrogenase | EPS31_01420 | Not Available | Positive | 299970 - 301274 | 46021.6 |
| histidinol-phosphate transaminase | EPS31_01425 | Not Available | Positive | 301271 - 302341 | 39367.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | EPS31_01430 | Not Available | Positive | 302341 - 303408 | 40265.3 |
| imidazole glycerol phosphate synthase subunit hish | EPS31_01435 | Not Available | Positive | 303408 - 303998 | 21668.1 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






