Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS31_01335 | Not Available | Positive | 287254 - 287448 | 6959.16 |
| duf957 domain-containing protein | EPS31_01340 | Not Available | Positive | 287461 - 287574 | 4241.28 |
| ethanolamine utilization protein | EPS31_01350 | Not Available | Positive | 288063 - 288245 | 6488.86 |
| duf496 family protein | EPS31_01355 | Not Available | Negative | 288346 - 288675 | 12778.5 |
| fusc family protein | EPS31_01360 | Not Available | Negative | 288847 - 289905 | 39942.7 |
| dna gyrase inhibitor sbmc | EPS31_01365 | Not Available | Negative | 290103 - 290576 | 18076.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | EPS31_01370 | Not Available | Negative | 290695 - 291861 | 43304.5 |
| exodeoxyribonuclease i | EPS31_01375 | Not Available | Positive | 292070 - 293497 | 54395.5 |
| hypothetical protein | EPS31_01380 | Not Available | Negative | 293540 - 293767 | 8092.61 |
| yeee/yede family protein | EPS31_01385 | Not Available | Negative | 293781 - 294839 | 38002.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






