Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | EPS31_01225 | Not Available | Positive | 268629 - 269822 | 42169.1 |
| multidrug efflux rnd transporter permease subunit | EPS31_01230 | Not Available | Positive | 269845 - 272994 | 113557.0 |
| hha toxicity modulator tomb | EPS31_01235 | Not Available | Positive | 273540 - 273914 | 14558.1 |
| hemolysin expression modulator hha | EPS31_01240 | Not Available | Positive | 273940 - 274158 | 8628.46 |
| maltose o-acetyltransferase | EPS31_01245 | Not Available | Positive | 274330 - 274881 | 20097.2 |
| hypothetical protein | EPS31_01250 | Not Available | Positive | 274997 - 275467 | 18268.2 |
| cyclic-guanylate-specific phosphodiesterase pdeb | EPS31_01255 | Not Available | Positive | 275631 - 277181 | 58802.9 |
| duf1428 family protein | EPS31_01260 | Not Available | Negative | 277223 - 277576 | 13347.0 |
| dna base-flipping protein | EPS31_01270 | Not Available | Positive | 277877 - 278266 | 14450.4 |
| hypothetical protein | EPS31_01275 | Not Available | Negative | 278297 - 278869 | 19442.3 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






