Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS31_01065 | Not Available | Negative | 212293 - 212655 | 14184.9 |
| adhesin | EPS31_01070 | Not Available | Positive | 213022 - 214038 | 36122.6 |
| hypothetical protein | EPS31_01075 | Not Available | Positive | 214092 - 214514 | 15245.2 |
| hypothetical protein | EPS31_01080 | Not Available | Positive | 214511 - 214714 | 7500.42 |
| hth-type transcriptional regulator cuer | EPS31_01085 | Not Available | Negative | 214718 - 215125 | 15235.1 |
| hlyd family type i secretion periplasmic adaptor subunit | EPS31_01090 | Not Available | Negative | 215122 - 216297 | 43631.4 |
| type i secretion system permease/atpase | EPS31_01095 | Not Available | Negative | 216294 - 218456 | 80749.7 |
| bapa prefix-like domain-containing protein | EPS31_01100 | Not Available | Negative | 218460 - 239234 | 688916.0 |
| transporter | EPS31_01105 | Not Available | Negative | 239343 - 240698 | 49299.9 |
| amino acid permease | EPS31_01110 | Not Available | Negative | 241035 - 242327 | 45685.6 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






