Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate 3-kinase | EPS31_00965 | Not Available | Negative | 190064 - 191209 | 38719.0 |
| uracil/xanthine transporter | EPS31_00970 | Not Available | Negative | 191231 - 192532 | 47242.2 |
| allantoinase allb | EPS31_00975 | Not Available | Negative | 192589 - 193950 | 49491.3 |
| putative allantoin permease | EPS31_00980 | Not Available | Negative | 194011 - 195465 | 52421.1 |
| 2-hydroxy-3-oxopropionate reductase | EPS31_00985 | Not Available | Negative | 195634 - 196512 | 30802.5 |
| hydroxypyruvate isomerase | EPS31_00990 | Not Available | Negative | 196612 - 197388 | 29400.1 |
| glyoxylate carboligase | EPS31_00995 | Not Available | Negative | 197401 - 199182 | 64778.6 |
| hth-type transcriptional repressor allr | EPS31_01000 | Not Available | Negative | 199272 - 200087 | 29271.4 |
| ureidoglycolate lyase | EPS31_01005 | Not Available | Negative | 200165 - 200647 | 18223.6 |
| hth-type transcriptional activator alls | EPS31_01010 | Not Available | Positive | 200877 - 201803 | 34500.6 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






