Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | EPS31_00915 | Not Available | Positive | 179313 - 180035 | 26867.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EPS31_00920 | Not Available | Positive | 180153 - 180662 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EPS31_00925 | Not Available | Positive | 180659 - 181726 | 39481.4 |
| carbamate kinase | EPS31_00930 | Not Available | Negative | 181863 - 182756 | 31689.1 |
| duf2877 domain-containing protein | EPS31_00935 | Not Available | Negative | 182753 - 183568 | 29696.0 |
| duf1116 domain-containing protein | EPS31_00940 | Not Available | Negative | 183579 - 184838 | 44982.6 |
| acyl-coa synthetase fdra | EPS31_00945 | Not Available | Negative | 184848 - 186515 | 58478.4 |
| ureidoglycolate dehydrogenase | EPS31_00950 | Not Available | Positive | 186832 - 187881 | 37907.3 |
| allantoate amidohydrolase | EPS31_00955 | Not Available | Positive | 187903 - 189138 | 45657.5 |
| (s)-ureidoglycine aminohydrolase | EPS31_00960 | Not Available | Positive | 189149 - 189934 | 28747.1 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






