Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbriae assembly protein | EPS31_00865 | Not Available | Negative | 169401 - 169916 | 18153.5 |
| type 1 fimbrin d-mannose specific adhesin fimh | EPS31_00870 | Not Available | Negative | 169927 - 170934 | 36692.1 |
| fimbrial biogenesis outer membrane usher protein | EPS31_00875 | Not Available | Negative | 170947 - 173556 | 96016.6 |
| molecular chaperone fimc | EPS31_00880 | Not Available | Negative | 173587 - 174279 | 25459.1 |
| type 1 fimbrial protein subunit fima | EPS31_00885 | Not Available | Negative | 174499 - 175041 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EPS31_00890 | Not Available | Positive | 175512 - 176378 | 30957.5 |
| ribosome-associated protein ybcj | EPS31_00895 | Not Available | Positive | 176380 - 176592 | 7403.98 |
| metal-dependent hydrolase | EPS31_00900 | Not Available | Positive | 176700 - 177221 | 19495.6 |
| cysteine--trna ligase | EPS31_00905 | Not Available | Negative | 177257 - 178642 | 52186.9 |
| peptidylprolyl isomerase b | EPS31_00910 | Not Available | Positive | 178816 - 179310 | 18184.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






