Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | EPS31_00815 | Not Available | Positive | 158588 - 159922 | 50646.5 |
| hypothetical protein | EPS31_00820 | Not Available | Positive | 159961 - 160170 | 7953.64 |
| type iv secretion protein rhs | EPS31_00825 | Not Available | Positive | 160285 - 160596 | 12163.7 |
| isas1 family transposase | EPS31_00830 | Not Available | Positive | 160700 - 161026 | 12607.0 |
| phage adsorption protein nrfb | EPS31_00835 | Not Available | Positive | 161370 - 163607 | 85338.3 |
| phage receptor | EPS31_00840 | Not Available | Positive | 163594 - 166566 | 111366.0 |
| duf4434 family protein | EPS31_00845 | Not Available | Positive | 166567 - 167457 | 33046.5 |
| helix-turn-helix domain-containing protein | EPS31_00850 | Not Available | Positive | 167640 - 168401 | 28992.5 |
| Trna-arg | Not Available | Not Available | Positive | 168447 - 168523 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimz | EPS31_00860 | Not Available | Positive | 168766 - 169398 | 23691.9 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






