Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid transporter arop | EPS31_00755 | Not Available | Negative | 142025 - 143401 | 50648.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | EPS31_00760 | Not Available | Negative | 143503 - 146646 | 114756.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | EPS31_00765 | Not Available | Negative | 146658 - 147881 | 44454.5 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EPS31_00770 | Not Available | Negative | 147897 - 148229 | 12326.0 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | EPS31_00775 | Not Available | Negative | 148253 - 149635 | 50696.8 |
| copper response regulator transcription factor cusr | EPS31_00780 | Not Available | Positive | 149792 - 150475 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | EPS31_00785 | Not Available | Positive | 150465 - 151913 | 54151.7 |
| type vi secretion system tip protein vgrg | EPS31_00790 | Not Available | Positive | 152650 - 154551 | 71345.9 |
| duf1795 domain-containing protein | EPS31_00795 | Not Available | Positive | 154579 - 155040 | 17319.4 |
| hypothetical protein | EPS31_00805 | Not Available | Positive | 156590 - 157693 | 41956.2 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






