Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore enterobactin receptor fepa | EPS31_00710 | Not Available | Positive | 134225 - 136465 | 82112.3 |
| enterobactin synthase subunit entd | EPS31_00715 | Not Available | Positive | 136640 - 137260 | 22991.6 |
| type i toxin-antitoxin system hok family toxin | EPS31_00720 | Not Available | Negative | 137382 - 137534 | 5691.25 |
| hypothetical protein | EPS31_00725 | Not Available | Positive | 137533 - 137772 | 8830.96 |
| glutamate--cysteine ligase | EPS31_00730 | Not Available | Positive | 137977 - 139095 | 41696.7 |
| duf1158 domain-containing protein | EPS31_00735 | Not Available | Positive | 139161 - 139409 | 9434.09 |
| mmcq/yjbr family dna-binding protein | EPS31_00740 | Not Available | Positive | 139474 - 139842 | 14051.1 |
| oxygen-insensitive nad(p)h nitroreductase | EPS31_00745 | Not Available | Positive | 139936 - 140589 | 23906.4 |
| mechanosensitive ion channel family protein | EPS31_00750 | Not Available | Positive | 140697 - 141944 | 46639.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 143050 - 143426 | Not Available |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






