Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 domain-containing protein | EPS31_00370 | Not Available | Positive | 63598 - 64305 | 26730.4 |
| tyrosine recombinase xerc | EPS31_00375 | Not Available | Positive | 64302 - 65198 | 33929.8 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | EPS31_00380 | Not Available | Positive | 65198 - 65914 | 27123.4 |
| dna helicase ii | EPS31_00385 | Not Available | Positive | 65998 - 68160 | 82008.7 |
| acetolactate synthase | EPS31_00390 | Not Available | Negative | 68205 - 69107 | 32653.9 |
| magnesium/cobalt transporter cora | EPS31_00400 | Not Available | Positive | 70323 - 71273 | 36591.8 |
| duf943 family protein | EPS31_00405 | Not Available | Negative | 71314 - 71805 | 19592.4 |
| duf3289 family protein | EPS31_00410 | Not Available | Negative | 71802 - 72650 | 32917.2 |
| eama family transporter rard | EPS31_00415 | Not Available | Negative | 72961 - 73851 | 33267.0 |
| thioesterase family protein | EPS31_00420 | Not Available | Negative | 73903 - 74370 | 17163.8 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






