Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iii flippase wzxe | EPS31_00270 | Not Available | Positive | 44310 - 45560 | 44962.3 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | EPS31_00275 | Not Available | Positive | 45557 - 46636 | 40513.7 |
| o-antigen assembly polymerase | EPS31_00280 | Not Available | Positive | 46633 - 47985 | 51501.1 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | EPS31_00285 | Not Available | Positive | 47988 - 48728 | 28024.0 |
| amino acid permease | EPS31_00290 | Not Available | Positive | 48919 - 50304 | 50423.1 |
| Trna-arg | Not Available | Not Available | Positive | 50407 - 50483 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 50542 - 50617 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 50638 - 50724 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 50767 - 50843 | Not Available |
| anaerobic sulfatase maturase | EPS31_00315 | Not Available | Positive | 50990 - 52225 | 46414.6 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






