Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS31_00145 | Not Available | Positive | 18693 - 18743 | 1910.25 |
| acetolactate synthase 2 catalytic subunit | EPS31_00150 | Not Available | Positive | 18746 - 20392 | 59294.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 19671 - 19805 | Not Available |
| acetolactate synthase 2 small subunit | EPS31_00155 | Not Available | Positive | 20389 - 20652 | 9703.74 |
| branched-chain-amino-acid transaminase | EPS31_00160 | Not Available | Positive | 20672 - 21601 | 34095.6 |
| dihydroxy-acid dehydratase | EPS31_00165 | Not Available | Positive | 21666 - 23516 | 65581.5 |
| threonine ammonia-lyase, biosynthetic | EPS31_00170 | Not Available | Positive | 23519 - 25063 | 56217.5 |
| hth-type transcriptional activator ilvy | EPS31_00175 | Not Available | Negative | 25060 - 25950 | 33064.1 |
| ketol-acid reductoisomerase | EPS31_00180 | Not Available | Positive | 26100 - 27575 | 54072.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 26673 - 26804 | Not Available |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






