Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | EPS31_01760 | Not Available | Negative | 378947 - 379465 | 19069.8 |
| Phage tail sheath protein fi | EPS31_01765 | Not Available | Negative | 379478 - 380668 | 43063.9 |
| hypothetical protein | EPS31_01770 | Not Available | Negative | 381179 - 381703 | 19338.1 |
| hypothetical protein | EPS31_01775 | Not Available | Negative | 381829 - 382479 | 24350.2 |
| Tail fiber assembly protein | EPS31_01780 | Not Available | Negative | 382774 - 383301 | 20255.9 |
| Tail fiber protein | EPS31_01785 | Not Available | Negative | 383303 - 385477 | 77836.5 |
| Baseplate assembly | EPS31_01790 | Not Available | Negative | 385488 - 386018 | 19599.4 |
| Baseplate assembly protein j | EPS31_01795 | Not Available | Negative | 386011 - 386919 | 32808.8 |
| Baseplate wedge subunit | EPS31_01800 | Not Available | Negative | 386924 - 387271 | 12638.3 |
| Baseplate assembly protein v | EPS31_01805 | Not Available | Negative | 387268 - 387903 | 22140.3 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






