Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS31_23660 | Not Available | Positive | 4741595 - 4741825 | 8810.9 |
| hypothetical protein | EPS31_23665 | Not Available | Positive | 4741818 - 4742045 | 8311.16 |
| duf4222 domain-containing protein | EPS31_23670 | Not Available | Positive | 4742051 - 4742350 | 11654.2 |
| Dna primase | EPS31_23675 | Not Available | Positive | 4742347 - 4744101 | 64825.6 |
| hypothetical protein | EPS31_23680 | Not Available | Positive | 4744390 - 4744668 | 10374.3 |
| Single-stranded dna-binding protein ssb | EPS31_23685 | Not Available | Positive | 4744665 - 4745075 | 14371.9 |
| Hypothetical protein | EPS31_23690 | Not Available | Positive | 4745086 - 4745334 | 9531.37 |
| hypothetical protein | EPS31_23695 | Not Available | Positive | 4745589 - 4745795 | 7273.82 |
| Bacteriophage major capsid protein | EPS31_23700 | Not Available | Positive | 4745795 - 4746850 | 39558.3 |
| Head decoration protein d | EPS31_23705 | Not Available | Positive | 4746862 - 4747197 | 11911.0 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






