Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | EPS31_23430 | Not Available | Negative | 4708153 - 4709437 | 46714.0 |
| Tail component | EPS31_23435 | Not Available | Negative | 4709418 - 4709831 | 15239.0 |
| Tail component | EPS31_23440 | Not Available | Negative | 4709858 - 4710289 | 15709.5 |
| Major tail protein v | EPS31_23445 | Not Available | Negative | 4710308 - 4711054 | 26297.9 |
| Tail component | EPS31_23450 | Not Available | Negative | 4711062 - 4711457 | 14880.3 |
| Tail component | EPS31_23455 | Not Available | Negative | 4711454 - 4711987 | 20100.0 |
| Head-tail joining protein | EPS31_23460 | Not Available | Negative | 4712003 - 4712356 | 12644.8 |
| Bacteriophage accessory dna packaging protein | EPS31_23465 | Not Available | Negative | 4712349 - 4712732 | 13913.3 |
| Bacteriophage major capsid protein | EPS31_23470 | Not Available | Negative | 4712784 - 4713812 | 38484.8 |
| Bacteriophage head decoration protein | EPS31_23475 | Not Available | Negative | 4713870 - 4714217 | 11926.1 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






