Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 991242 - 991317 | Not Available |
| yebc/pmpr family dna-binding transcriptional regulator | EPS31_04675 | Not Available | Negative | 991771 - 992487 | 25868.5 |
| amp nucleosidase | EPS31_04680 | Not Available | Negative | 992830 - 994284 | 54038.0 |
| shikimate transporter | EPS31_04685 | Not Available | Negative | 994386 - 995702 | 47784.1 |
| lipopolysaccharide heptosyltransferase family protein | EPS31_04690 | Not Available | Positive | 996017 - 997069 | 39517.5 |
| autotransporter | EPS31_04695 | Not Available | Negative | 997197 - 999155 | 67038.3 |
| adhesin | EPS31_04700 | Not Available | Negative | 999191 - 999361 | 6021.1 |
| inverse autotransporter beta-barrel domain-containing protein | EPS31_04705 | Not Available | Negative | 999288 - 999998 | 26533.7 |
| siderophore yersiniabactin receptor fyua | EPS31_04710 | Not Available | Negative | 1000689 - 1002710 | 73657.0 |
| yersiniabactin biosynthesis salycil-amp ligase ybte | EPS31_04715 | Not Available | Negative | 1002841 - 1004418 | 57256.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






