Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaef family permuted papain-like enzyme | EPS31_04500 | Not Available | Negative | 956832 - 957656 | 29935.9 |
| proline--trna ligase | EPS31_04505 | Not Available | Negative | 957709 - 959427 | 63640.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EPS31_04510 | Not Available | Negative | 959538 - 960245 | 26362.8 |
| rcs stress response system protein rcsf | EPS31_04515 | Not Available | Negative | 960242 - 960646 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | EPS31_04520 | Not Available | Negative | 960764 - 961579 | 29419.2 |
| methionine abc transporter | EPS31_04525 | Not Available | Negative | 961619 - 962272 | 23257.6 |
| d-methionine abc transporter, atp-binding protein | EPS31_04530 | Not Available | Negative | 962265 - 963296 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EPS31_04535 | Not Available | Positive | 963483 - 964055 | 21125.2 |
| is5-like element is5 family transposase | EPS31_04540 | Not Available | Negative | 964498 - 965514 | 39202.3 |
| Trna-asn | Not Available | Not Available | Positive | 966471 - 966546 | Not Available |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






