Shigella sonnei str. 75/02

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei str. 75/02 is a Gram-negative, rod-shaped bacterium that typically appears as single cells or in pairs. This strain optimally grows at a temperature of 37.0°C, which corresponds with the normal human body temperature, suggesting an adaptation to a host-associated habitat. As a chemoorganotroph, it derives energy from organic compounds, reflecting its reliance on a nutrient-rich environment often found within host organisms. Additionally, S. sonnei str. 75/02 is classified as a facultative anaerobe, indicating its capability to survive in both aerobic and anaerobic conditions, which may enhance its persistence in diverse microenvironments within the host. The ability of S. sonnei to thrive in the human gastrointestinal tract, coupled with its metabolic flexibility, positions it as a notable member of the enteric microbiota. Understanding these traits can provide insights into its survival strategies and potential interactions within the host, including its response to variations in oxygen availability and nutrient composition. This adaptability may contribute to its competitive edge in colonizing the gut, underscoring the importance of host-associated environments in shaping the physiological traits of pathogenic microbes like Shigella sonnei.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
Strain75/02

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei str. 75/02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Pteropodidae
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella sonnei strain 75/02 plasmid p75-02_5, complete sequence.

Gene Summary

Adenine Count

1326 bp

Thymine Count

1417 bp

Guanine Count

1244 bp

Cytosine Count

1127 bp

Genome Length

5114 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucine efflux protein leueBZ172_RS22525Not AvailablePositive4139162 - 413980023259.0
duf1971 domain-containing protein yearBZ172_RS22530Not AvailablePositive4139973 - 414033213670.2
duf1869 domain-containing proteinBZ172_RS22535Not AvailablePositive4140336 - 41405186608.63
glsb/yeaq/ymge family stress response membrane proteinBZ172_RS22540Not AvailablePositive4140666 - 41409148671.14
protein yoajBZ172_RS22545Not AvailableNegative4140973 - 41410472691.57
yoak family small membrane proteinBZ172_RS22550Not AvailableNegative4141050 - 41411483458.45
diguanylate cyclase dgcpBZ172_RS22555Not AvailableNegative4141181 - 414220638438.6
duf333 domain-containing lipoprotein yoafBZ172_RS22560Not AvailablePositive4142389 - 41426438891.77
duf488 domain-containing proteinBZ172_RS22565Not AvailableNegative4142665 - 414301213340.9
2-nitroimidazole transporterBZ172_RS22570Not AvailableNegative4143067 - 414424841282.0

Displaying genes 4371 – 4380 of 5262 in total

Pathways

16 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC2600399
ShigellosisCausesPMC5177732
Diarrheal diseaseCausesPMC5177732
ShigellosisCausesPMC6038740
ShigellosisCausesPMC2271788
ShigellosisCausesPMC5447701
Bacterial dysenteryCausesPMC5447701
DiarrheaCausesPMC8886675
DysenteryCausesPMC8886675
ShigellosisCausesPMC8886675

Displaying health effects 1 – 10 of 11 in total