Serratia marcescens str. B3R3

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia marcescens str. B3R3 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37.0°C. As a chemoheterotroph, this strain utilizes organic compounds as its energy source, allowing it to inhabit a variety of environments. The nonsporulating nature of S. marcescens str. B3R3 indicates that it relies on other survival strategies rather than endospore formation to withstand unfavorable conditions. This microbe is part of a genus known for its adaptability and diverse ecological niches, often found in soil, water, and as part of the microbiota in various organisms. The ability to grow in both aerobic and anaerobic conditions enhances its survival and proliferation across different habitats. Its metabolic versatility enables S. marcescens str. B3R3 to exploit a range of organic substrates, which may provide insights into its role in nutrient cycling within its ecosystems. Understanding the traits of S. marcescens str. B3R3 emphasizes the importance of studying its ecological interactions, particularly in environments where organic matter is abundant. This adaptability suggests that the bacterium may play a significant role in the decomposition processes and nutrient dynamics of its habitats, contributing to the overall microbial community structure and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia marcescens
StrainB3R3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia marcescens str. B3R3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Insecta
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Serratia marcescens strain B3R3 plasmid unnamed1, complete

Gene Summary

Adenine Count

30114 bp

Thymine Count

29415 bp

Guanine Count

32389 bp

Cytosine Count

31253 bp

Genome Length

123171 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer mating-pair stabilization protein tragAR325_RS26700Not AvailablePositive98737 - 101568102164.0
hypothetical proteinAR325_RS26705Not AvailablePositive101565 - 10209819615.5
hypothetical proteinAR325_RS26710Not AvailablePositive102101 - 1023107485.11
type iv conjugative transfer system coupling protein tradAR325_RS26715Not AvailablePositive102300 - 10449881694.7
trna(fmet)-specific endonuclease vapcAR325_RS26720Not AvailableNegative104534 - 10493214708.9
toxin-antitoxin system antitoxin vapbAR325_RS26725Not AvailableNegative104932 - 1051598469.96
conjugative transfer relaxase/helicase traiAR325_RS26730Not AvailablePositive105277 - 110583189699.0
duf3440 domain-containing proteinAR325_RS26740Not AvailablePositive110926 - 11135115532.4
trax family proteinAR325_RS26745Not AvailablePositive111365 - 11211727343.6
replication regulatory protein repaAR325_RS26750Not AvailablePositive112272 - 1125239590.59

Displaying genes 101 – 110 of 118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

401 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 401 metabolites

Health Effects

Health ConditionRelationReference
Early onset neonatal sepsisCausesPMC4560869
Nosocomial infectionsCausesPMC7311988
White pox diseaseCausesPMC8449677
SepticaemiaCausesPMC11834430

Displaying health effects 1 – 4 of 4 in total