Klebsiella pneumoniae str. XJ-K1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain XJ-K1 is a Gram-negative, rod-shaped bacterium that typically exists in chains, pairs, or singly. This strain is nonsporulating and exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. The optimal growth temperature for K. pneumoniae XJ-K1 is 37.0°C, which corresponds to the average human body temperature, indicating its potential association with host organisms. As a chemoheterotroph, this bacterium derives energy from organic compounds, which supports its survival in host-associated habitats. Klebsiella pneumoniae is known for its versatility in adapting to various environmental conditions, particularly within host organisms, where it may play a role in complex microbial communities. The ability of K. pneumoniae XJ-K1 to form chains and pairs may facilitate interactions with other microorganisms and host cells, potentially influencing its ecological niche and interactions within the microbiome. This characteristic could provide insights into its role in microbial dynamics and the maintenance of homeostasis in host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
StrainXJ-K1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae str. XJ-K1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain XJ-K1 plasmid unnamed1, complete

Gene Summary

Adenine Count

51595 bp

Thymine Count

51337 bp

Guanine Count

51865 bp

Cytosine Count

52612 bp

Genome Length

207409 bp

Protein-coding Genes

224 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system vgr family proteinD3H40_RS15050Not AvailableNegative2998724 - 300109386675.7
type vi secretion system atpase tsshD3H40_RS15055Not AvailableNegative3001095 - 300374996940.8
type vi secretion system effector hcpD3H40_RS15060Not AvailableNegative3004014 - 300450518762.0
ompa family proteinD3H40_RS15065Not AvailableNegative3004510 - 300621661993.0
type vi secretion system protein tssl, short formD3H40_RS15070Not AvailableNegative3006213 - 300690225545.0
type vi secretion system baseplate subunit tsskD3H40_RS15075Not AvailableNegative3006899 - 300824250597.1
lysr family transcriptional regulatorD3H40_RS15455Not AvailablePositive3059145 - 306005932736.6
hypothetical proteinD3H40_RS15460Not AvailablePositive3060360 - 30605487046.51
azld domain-containing proteinD3H40_RS15465Not AvailableNegative3060619 - 30608829585.19
glycosyl hydrolase family 2D3H40_RS30795Not AvailablePositive3060933 - 30610704815.65

Displaying genes 3681 – 3690 of 5820 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total