Klebsiella oxytoca

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella oxytoca is a Gram-negative, non-motile bacterium characterized by its rod shape and facultative anaerobic metabolism. This microbe thrives as a chemoheterotroph, utilizing organic compounds for energy and carbon. It optimally grows at a temperature of 37.0°C, situating it within the mesophilic temperature classification. Notably, K. oxytoca is nonsporulating and possesses true flagella, although it does not exhibit motility. K. oxytoca is found in multiple habitats, indicating its adaptability to diverse environments. Its genomic structure comprises two replicons, with accessions available under NZ_CP017932.1 and QDDT00000000.1, contributing to its genetic diversity and potential for various metabolic processes. The ability of K. oxytoca to thrive in different environments may reflect its ecological versatility, allowing it to participate in various nutrient cycles. This adaptability underscores the importance of studying its role in microbial communities and potential interactions within its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella oxytoca
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Klebsiella oxytoca
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-76, complete

Gene Summary

Adenine Count

18516 bp

Thymine Count

17530 bp

Guanine Count

20745 bp

Cytosine Count

19395 bp

Genome Length

76186 bp

Protein-coding Genes

96 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanosine-5'-triphosphate,3'-diphosphate diphosphataseDDJ66_25130Not AvailableNegative5223069 - 522456855438.3
atp-dependent rna helicase rhlbDDJ66_25135Not AvailableNegative5224703 - 522596847211.6
thioredoxin trxaDDJ66_25140Not AvailablePositive5226310 - 522663911865.3
transcription termination factor rhoDDJ66_25145Not AvailablePositive5226969 - 522822847025.0
udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferaseDDJ66_25150Not AvailablePositive5228471 - 522956540561.3
eca polysaccharide chain length modulation proteinDDJ66_25155Not AvailablePositive5229587 - 523063339569.3
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)DDJ66_25160Not AvailablePositive5230690 - 523182041868.6
udp-n-acetyl-d-mannosamine dehydrogenaseDDJ66_25165Not AvailablePositive5231817 - 523307945482.9
dtdp-glucose 4,6-dehydrataseDDJ66_25170Not AvailablePositive5233076 - 523414339594.5
glucose-1-phosphate thymidylyltransferaseDDJ66_25175Not AvailablePositive5234162 - 523504332637.3

Displaying genes 5051 – 5060 of 6348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

44 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm00031592,5-dihydroxybenzoateC7H5O4Chemical structure of 2,5-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.0193322Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm00041812-hydroxyethane-1-sulfonateC2H5O4SChemical structure of 2-hydroxyethane-1-sulfonateNot available
Average125.12Da
Monoisotopic124.991403395Da

Displaying 1–10 of 44 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial bronchopneumoniaCausesPMC13013407
SepticaemiaCausesPMC13013407
Urinary tract infectionsCausesPMC13013407
Antibiotic associated haemorrhagic colitisCausesPMC5560551
Antibiotic associated diarrhoeaCausesPMC5560551
DiarrhoeaCausesPMC5560551
Haemorrhagic colitisCausesPMC5560551
Otitis mediaCausesPMC8155880
Catheter-associated urinary tract infectionCausesPMC2900259
CautiCausesPMC2900259

Displaying health effects 1 – 10 of 10 in total