Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_03240 | Not Available | Negative | 631940 - 632800 | 32224.6 |
| hypothetical protein | DM102_03245 | Not Available | Negative | 632700 - 632930 | 8966.92 |
| type iii effector | DM102_03250 | Not Available | Negative | 633038 - 635152 | 79835.2 |
| duf3343 domain-containing protein | DM102_03255 | Not Available | Negative | 635463 - 635729 | 9923.93 |
| hypothetical protein | DM102_03260 | Not Available | Negative | 635726 - 636493 | 27227.8 |
| 2-hydroxyacyl-coa dehydratase | DM102_03265 | Not Available | Negative | 636503 - 637654 | 42777.2 |
| duf445 domain-containing protein | DM102_03270 | Not Available | Negative | 637770 - 639050 | 48191.6 |
| multidrug resistance protein mdtm | DM102_03275 | Not Available | Negative | 639091 - 640323 | 44596.1 |
| plp-dependent aminotransferase family protein | DM102_03285 | Not Available | Negative | 642000 - 643412 | 53067.8 |
| duf1127 domain-containing protein | DM102_03290 | Not Available | Positive | 643589 - 643753 | 6679.14 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





