Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | DM102_03135 | Not Available | Positive | 608775 - 611411 | 96531.8 |
| protein fimf | DM102_03140 | Not Available | Positive | 611421 - 611951 | 18716.3 |
| type 1 fimbrial protein | DM102_03145 | Not Available | Positive | 611964 - 612467 | 17389.4 |
| fimbrial protein | DM102_03150 | Not Available | Positive | 612487 - 613389 | 31431.1 |
| gluconate permease | DM102_03155 | Not Available | Negative | 613562 - 614905 | 47169.0 |
| hypothetical protein | DM102_03160 | Not Available | Positive | 614985 - 615293 | 11727.3 |
| mannonate dehydratase | DM102_03165 | Not Available | Positive | 615245 - 616429 | 44796.5 |
| fructuronate reductase | DM102_03170 | Not Available | Positive | 616510 - 617970 | 53689.3 |
| hypothetical protein | DM102_03175 | Not Available | Negative | 617992 - 618186 | 6932.61 |
| gntr family transcriptional regulator | DM102_03180 | Not Available | Positive | 618185 - 618958 | 29291.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





