Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_02725 | Not Available | Negative | 527999 - 528178 | 7082.93 |
| hypothetical protein | DM102_02730 | Not Available | Positive | 528093 - 529004 | 34903.4 |
| ytfj family protein | DM102_02740 | Not Available | Negative | 529094 - 529648 | 20406.7 |
| duf1107 domain-containing protein | DM102_02745 | Not Available | Positive | 529973 - 530179 | 8072.24 |
| hlyc/corc family transporter | DM102_02750 | Not Available | Negative | 530241 - 531584 | 49783.6 |
| peptide-methionine (s)-s-oxide reductase | DM102_02755 | Not Available | Negative | 531907 - 532545 | 23316.3 |
| hypothetical protein | DM102_02760 | Not Available | Positive | 532602 - 532781 | 6739.28 |
| translocation and assembly module tama | DM102_02765 | Not Available | Positive | 532751 - 534484 | 64783.7 |
| autotransporter assembly complex protein tamb | DM102_02770 | Not Available | Positive | 534481 - 538260 | 136851.0 |
| gamma-glutamylcyclotransferase | DM102_02775 | Not Available | Positive | 538263 - 538604 | 12879.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





