Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DM102_02670 | Not Available | Positive | 517918 - 518340 | 15203.2 |
| hypothetical protein | DM102_02680 | Not Available | Negative | 518475 - 519113 | 23522.9 |
| peptidylprolyl isomerase | DM102_02685 | Not Available | Positive | 519331 - 519951 | 22217.5 |
| d-serine/d-alanine/glycine transporter | DM102_02690 | Not Available | Positive | 520260 - 521672 | 51676.6 |
| iron-sulfur cluster repair di-iron protein | DM102_02695 | Not Available | Negative | 521717 - 522379 | 24870.0 |
| eama/rhat family transporter | DM102_02700 | Not Available | Negative | 522487 - 523452 | 35245.6 |
| sdr family nad(p)-dependent oxidoreductase | DM102_02705 | Not Available | Negative | 523561 - 524421 | 29799.3 |
| transcriptional regulator | DM102_02710 | Not Available | Positive | 524510 - 524890 | 14094.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | DM102_02715 | Not Available | Negative | 525008 - 526951 | 70863.1 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DM102_02720 | Not Available | Positive | 527141 - 527881 | 27205.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





