Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DM102_02310 | Not Available | Positive | 441400 - 441879 | 17901.5 |
| leucine-rich repeat domain-containing protein | DM102_02315 | Not Available | Negative | 442017 - 442232 | 8377.08 |
| leucine-rich repeat domain-containing protein | DM102_02320 | Not Available | Negative | 442328 - 443131 | 30227.2 |
| flagellar hook-basal body complex protein flie | DM102_02330 | Not Available | Negative | 443482 - 443796 | 11157.5 |
| hypothetical protein | DM102_02335 | Not Available | Negative | 443841 - 444035 | 7160.7 |
| flagellar basal body m-ring protein flif | DM102_02340 | Not Available | Positive | 444011 - 445669 | 60583.6 |
| flagellar motor switch protein flig | DM102_02345 | Not Available | Positive | 445662 - 446657 | 36778.2 |
| flagellar assembly protein flih | DM102_02350 | Not Available | Positive | 446650 - 447336 | 25070.6 |
| flagellum-specific atp synthase flii | DM102_02355 | Not Available | Positive | 447336 - 448709 | 49318.6 |
| flagellar protein flij | DM102_02360 | Not Available | Positive | 448728 - 449171 | 17325.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





