Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional activator flhd | DM102_02080 | Not Available | Negative | 405102 - 405452 | 13317.2 |
| universal stress protein uspc | DM102_02085 | Not Available | Positive | 406233 - 406661 | 15669.9 |
| trehalose-6-phosphate synthase | DM102_02090 | Not Available | Negative | 406668 - 408092 | 53614.1 |
| trehalose-phosphatase | DM102_02095 | Not Available | Negative | 408067 - 408867 | 29162.9 |
| arabinose abc transporter permease | DM102_02100 | Not Available | Negative | 409034 - 410020 | 34199.0 |
| l-arabinose abc transporter atp-binding protein arag | DM102_02105 | Not Available | Negative | 410035 - 411549 | 55051.6 |
| arabinose abc transporter substrate-binding protein | DM102_02110 | Not Available | Negative | 411619 - 412608 | 35542.9 |
| non-heme ferritin-like protein | DM102_02120 | Not Available | Positive | 413404 - 413907 | 18867.5 |
| duf2766 domain-containing protein | DM102_02125 | Not Available | Negative | 413987 - 414238 | 9146.15 |
| hypothetical protein | DM102_02130 | Not Available | Negative | 414353 - 414439 | 3408.36 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





