Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | DM102_01920 | Not Available | Negative | 373484 - 374095 | 22087.0 |
| hypothetical protein | DM102_01925 | Not Available | Negative | 374234 - 374299 | 2665.42 |
| yebb family permuted papain-like enzyme | DM102_01930 | Not Available | Positive | 374370 - 374972 | 22677.2 |
| crossover junction endodeoxyribonuclease ruvc | DM102_01935 | Not Available | Negative | 374974 - 375495 | 18748.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DM102_01940 | Not Available | Negative | 375530 - 376270 | 26438.1 |
| nudix pyrophosphatase | DM102_01945 | Not Available | Negative | 376299 - 376751 | 17292.6 |
| aspartate--trna ligase | DM102_01950 | Not Available | Negative | 376869 - 378641 | 65872.2 |
| hydrolase | DM102_01955 | Not Available | Positive | 378951 - 379517 | 20481.4 |
| duf72 domain-containing protein | DM102_01960 | Not Available | Positive | 379514 - 380332 | 31455.7 |
| hypothetical protein | DM102_01965 | Not Available | Positive | 380385 - 380780 | 15227.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





