Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate/shikimate dehydrogenase | DM102_01005 | Not Available | Positive | 201492 - 202358 | 31229.6 |
| 3-dehydroquinase | DM102_01010 | Not Available | Positive | 202389 - 203147 | 27454.2 |
| acetate coa-transferase ydif | DM102_01015 | Not Available | Positive | 203292 - 204887 | 57537.6 |
| acyl-coa dehydrogenase | DM102_01020 | Not Available | Positive | 204901 - 206052 | 43005.5 |
| arac family transcriptional regulator | DM102_01025 | Not Available | Negative | 206095 - 207006 | 34868.2 |
| hypothetical protein | DM102_01030 | Not Available | Negative | 207109 - 207285 | 6451.92 |
| electron transfer flavoprotein | DM102_01035 | Not Available | Positive | 207322 - 208086 | 27490.1 |
| fad-dependent oxidoreductase | DM102_01045 | Not Available | Positive | 209100 - 210389 | 45827.5 |
| ferredoxin family protein | DM102_01050 | Not Available | Positive | 210386 - 210679 | 10685.7 |
| cyclohexanecarboxylate-coa ligase | DM102_01055 | Not Available | Positive | 210736 - 212382 | 60709.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





