Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 5323600 - 5323675 | Not Available |
| type iv secretion protein rhs | DM102_28200 | Not Available | Positive | 5323864 - 5324408 | 20037.8 |
| rhs element protein | DM102_28205 | Not Available | Negative | 5324409 - 5324938 | 20068.9 |
| glutathione s-transferase | DM102_28210 | Not Available | Positive | 5325460 - 5325842 | 14342.3 |
| enoyl-coa hydratase | DM102_28215 | Not Available | Negative | 5325843 - 5326003 | 5753.84 |
| tetr/acrr family transcriptional regulator | DM102_28220 | Not Available | Positive | 5326091 - 5326288 | 7013.29 |
| deoxyguanosinetriphosphate triphosphohydrolase | DM102_28225 | Not Available | Negative | 5326289 - 5326720 | 16560.2 |
| hypothetical protein | DM102_28230 | Not Available | Negative | 5326873 - 5327028 | 6260.95 |
| duf945 domain-containing protein | DM102_28235 | Not Available | Negative | 5327149 - 5327576 | 16157.4 |
| class i sam-dependent methyltransferase | DM102_28240 | Not Available | Negative | 5327587 - 5328000 | 15786.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





