Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | DM102_27850 | Not Available | Negative | 5286046 - 5286120 | 2724.26 |
| is3 family transposase | DM102_27855 | Not Available | Positive | 5286121 - 5286298 | 7012.33 |
| hypothetical protein | DM102_27860 | Not Available | Negative | 5286841 - 5287458 | 24007.9 |
| alpa family phage regulatory protein | DM102_27865 | Not Available | Negative | 5287537 - 5287815 | 10621.0 |
| transcriptional regulator | DM102_27870 | Not Available | Negative | 5287784 - 5287906 | 4238.07 |
| anti-adapter protein iram | DM102_27880 | Not Available | Negative | 5289940 - 5290275 | 12769.6 |
| duf1737 domain-containing protein | DM102_27885 | Not Available | Positive | 5290521 - 5290724 | 7274.69 |
| hypothetical protein | DM102_27890 | Not Available | Positive | 5290721 - 5290882 | 5613.83 |
| holin | DM102_27895 | Not Available | Positive | 5291032 - 5291212 | 6729.25 |
| hypothetical protein | DM102_27900 | Not Available | Positive | 5291475 - 5291915 | 16398.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





